Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913454.1_cds_XP_016463503.1_56623
CDS Infomation

[gene=LOC107786528] [db_xref=GeneID:107786528] [protein=cellulose synthase-like protein H1] [protein_id=XP_016463503.1] [location=join(11294..11559,11650..11974,12899..13027,14289..14405,14508..14720,15227..15338,15528..15721,16184..16534,17002..17544)] [gbkey=CDS]
Sequence

ATGGCGCCCAAAACACCTCCTCTTCCTCTCTACGAAATTAAGTATCGAAAAAACGTTATT
TCAAGAGGAATAGAACTCTTCATTCTTTTCCTATTGTTCTCACTCTTAGCCTATAGACTC
CTCTCTCTTAAAAACCATGGTTTAAATTTGCCATTCTTCTTAGCTCTTATATGTGAATCA
TGGTTCACTTTCCTTTGGATTCTCATAGTCAGCACCAAATGGAATCAAGTCGAACCAAAA
ACATATCCTCTTCGCCTTTTGAAATGGACGTCAGAGTTTCCTGCAGTGGACATGTTCATT
ACAACTGCAGATCCCGTCCTAGAGCCGCCTCTTATAACAGTAAACACAATGTTATCATTA
TTAGCAGTGGATTATCCAGCTAATAAGCTAGCTTGTTATATATCTGATGATGGTGCATCT
CCTATTACCTATTATTCACTTGTTGAAGCAGCTAAATTTGCTAAGCTTTGGGTTCCTTTT
TGTAAGAAGTATAATATTGCACTTAGAGCCCCTTTTCGTTATTTTAATGCCAACTTATCG
CCACCCCAAGATAGTTCACAAGGGTTCCTGGAAGATTGGAAAAGGATGAAGGATGAATAT
AAACAGCTGTGTGAAAAGATAGAAGATGCAAGTACACAAGATTCAGAGGCATGTGATTTT
GCAGGAGATTTTGGTGTTTTCTCAAAAATTGAACGCAAAAACCATCCGACCATTATAAAG
GTAATATTGGAAAACAAGGAGGGTATTGCTGATGGCTTGCCTCACCTTGTCTACATCTCA
AGAGAGAAGCGTCCAAAGCATCCCCATCACTTCAAAGCTGGCGCCATGAATGTTCTGACT
AGAGTCTCTGGATTGATGACAAATGCTCCATTTATGCTGAATGTGGATTGTGATATGTTT
GCAAATAACCCACAAGTTGTTCAACATGCTATGTGTTATTTTCTTGGTGCTAAGGATGAA
AAAGATTGTGGTTTTGTTCAATTTCCACAATACTTCTACGATGGATTGAAAGATGATCCT
TATGGTAATCAATTCAAACTCTTACACGAGTATTTTGGAAGAGGAATTGCTGGAATTCAA
GGGCCATTTTATCAAGGAACAGGATGTTTCCACAGACGAAAAATTATATATGGCTTGTCA
CCAAATGATAAAATAAATACTGGAGAATTGAGGGATGAGTATCTGCAGAAAACTTATGGA
AAATCACAGAAGTTATTAGCATCGGTTGCTCAAACTCTATCAGCAGGATCAAATATTATT
GAGCAACTTAATTCTGATTCTCTCTCGAGTACCATTGAGGAAGCACACCAAATTGGAAGC
TGTGGATATGAATTTGGTACTGCCTGGGGTCAAAAGTTGGGCTGGCTATATGGATCTGCA
ACAGAGGATATCCACACTGGGCTTTCTATCCACGGGAGAGGCTGGAGATCCGCTTACTGT
ACACCCGACCCGCCTGCTTTTCTTGGATGTGCACCATCAGGTGGGCCGGCCATAATGATC
CAACAGAAGAGATGGGCTACTGGGCTTTTTGAAATTATTTTCTTCAGTAAAAGCCCAATT
ATCGGAACTCTTTTTGGAAAGCTTCAATTGAGACAATGCATGGCTTACTTGTATATCCAA
CTATGGGCCTTGAGATCCATTTTTGAAGTTTGCTATGCTATTCTGCCTGCCTATTGCCTG
ATCACCAATTCCAACTTTTTACCCAAGGCAAATGAACCAAGTATGACTATACCAGCATCA
ATATTTATCATCTACAATCTATATGGTTTATCAGAGTATGTTAGAGCAAATGAGTCAATT
AAAGCATGGTTAAACAATCAAAGAATGTGGAGAGTCAATGCTATGACTGCATGGCTATTT
GGGATTCTAAGTGCTACAACAAAATTACTTGGAATTTCTGAGACTGCATTTGAAGTTACA
AAAAAAGACCAAGGTAATGATGGAGATGACACAAATAATTCTAATAGTGGAAGGTTCACA
TTTGATGATTCACCAATATTTGTTCCTGGCACTGCAATTCTCTTATTGAACCTTAGTTCC
TTGTTCATTGGGATTTTAGATTTCAAACAAGGGAGAGATTTTGAATGGGGATTAGGAGAG
GTTATATGCATTATGTGGGTACTTTTCATATTTTGGCCATTCTTGAAAGGGTTATTTGCT
AAAGGGAAGTATGGGATTCCAGCAACAACTATTCTCAAGTCAGGGGCATTGGCATTGTTG
TTAGTTCATCTTTTCAAGTTTTACCAATAA

Peptide Sequence

PEP ID

XP_016463503.1
PEP Infomation

PREDICTED: cellulose synthase-like protein H1 [Nicotiana tabacum]
Sequence

MAPKTPPLPLYEIKYRKNVISRGIELFILFLLFSLLAYRLLSLKNHGLNLPFFLALICES
WFTFLWILIVSTKWNQVEPKTYPLRLLKWTSEFPAVDMFITTADPVLEPPLITVNTMLSL
LAVDYPANKLACYISDDGASPITYYSLVEAAKFAKLWVPFCKKYNIALRAPFRYFNANLS
PPQDSSQGFLEDWKRMKDEYKQLCEKIEDASTQDSEACDFAGDFGVFSKIERKNHPTIIK
VILENKEGIADGLPHLVYISREKRPKHPHHFKAGAMNVLTRVSGLMTNAPFMLNVDCDMF
ANNPQVVQHAMCYFLGAKDEKDCGFVQFPQYFYDGLKDDPYGNQFKLLHEYFGRGIAGIQ
GPFYQGTGCFHRRKIIYGLSPNDKINTGELRDEYLQKTYGKSQKLLASVAQTLSAGSNII
EQLNSDSLSSTIEEAHQIGSCGYEFGTAWGQKLGWLYGSATEDIHTGLSIHGRGWRSAYC
TPDPPAFLGCAPSGGPAIMIQQKRWATGLFEIIFFSKSPIIGTLFGKLQLRQCMAYLYIQ
LWALRSIFEVCYAILPAYCLITNSNFLPKANEPSMTIPASIFIIYNLYGLSEYVRANESI
KAWLNNQRMWRVNAMTAWLFGILSATTKLLGISETAFEVTKKDQGNDGDDTNNSNSGRFT
FDDSPIFVPGTAILLLNLSSLFIGILDFKQGRDFEWGLGEVICIMWVLFIFWPFLKGLFA
KGKYGIPATTILKSGALALLLVHLFKFYQ

Transcript Sequence

Gene sequence data has not been registered.